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phi Listeria monocytogenes

     PHIDIAS includes a list of programs for analysis of Listeria monocytogenes and the interactions between host and Listeria monocytogenes:

  • Listeria monocytogenes GBrowse: Listeria monocytogenes genome browser. This program allows searching, comparison, and visualization of Listeria monocytogenes genomes and individual DNA/protein/RNA sequences. It is part of PGBrowser and also allows comparison with other genome sequences.
  • Gene Query: This program searches Listeria monocytogenes and host genes. This is part of Phigen that also be used to compare with other pathogen genes.
  • Protein Domains in Listeria monocytogenes: This program searches Listeria monocytogenes -specific protein domains. As an integrated part of Pacodom, this program can also be used to search and compare protein domains of other pathogens
  • Listeria monocytogenes-specific Gene Expression: Phix