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phi Shigella

     PHIDIAS includes a list of programs for analysis of Shigella and the interactions between host and Shigella:

  • General Information: General information about Shigella and Bacillary dysentery, Shigellosis is described in Phinfo. Please click here for advanced topic search.
  • Shigella GBrowse: Shigella genome browser. This program allows searching, comparison, and visualization of Shigella genomes and individual DNA/protein/RNA sequences. It is part of PGBrowser and also allows comparison with other genome sequences.
  • Gene Query: This program searches Shigella and host genes. This is part of Phigen that also be used to compare with other pathogen genes.
  • Protein Domains in Shigella: This program searches Shigella -specific protein domains. As an integrated part of Pacodom, this program can also be used to search and compare protein domains of other pathogens
  • Host- Shigella Interaction Network: this program analyze networks involving the interactions between Shigella and hosts. It is part of Phinet that also targets for many other pathogens.
  • Shigella-specific Gene Expression: Phix

Other Relevant Projects Developed by He Group: