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phi Vaccinia virus

     PHIDIAS includes a list of programs for analysis of Vaccinia virus and the interactions between host and Vaccinia virus:

  • Vaccinia virus GBrowse: Vaccinia virus genome browser. This program allows searching, comparison, and visualization of Vaccinia virus genomes and individual DNA/protein/RNA sequences. It is part of PGBrowser and also allows comparison with other genome sequences.
  • Gene Query: This program searches Vaccinia virus and host genes. This is part of Phigen that also be used to compare with other pathogen genes.
  • Protein Domains in Vaccinia virus: This program searches Vaccinia virus -specific protein domains. As an integrated part of Pacodom, this program can also be used to search and compare protein domains of other pathogens
  • Vaccinia virus as a Hazard: This program aims to analyze Vaccinia virus-related safety and administrative issues. It is HazARD that is also able to compare safety and administrative issues between Vaccinia virusand other pathogens.
  • Vaccinia virus-specific Gene Expression: Phix